Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Piscirickettsiaceae
Genus
Methylophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Piscirickettsiaceae |
| Genus | Methylophaga |
| Species | Methylophaga frappieri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methylophaga frappieri str. JAM7
Accession NumberNC_017856.1
Gene Summary
Adenine Count
705888 bp
Thymine Count
702259 bp
Guanine Count
632271 bp
Cytosine Count
657047 bp
Genome Length
2697465 bp
Protein-coding Genes
2506 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-phosphoshikimate 1-carboxyvinyltransferase | Q7C_RS02235 | Not Available | - | 485410 - 486729 | 45934.5 |
| prephenate dehydrogenase | Q7C_RS02240 | Not Available | - | 486747 - 487634 | 31519.7 |
| histidinol-phosphate transaminase | Q7C_RS02245 | Not Available | - | 487627 - 488721 | 39158.0 |
| signal peptidase ii | Q7C_RS02250 | Not Available | - | 488718 - 489185 | 17298.6 |
| isoleucine--trna ligase | Q7C_RS02255 | Not Available | - | 489192 - 491978 | 103956.0 |
| duf3579 domain-containing protein | Q7C_RS02260 | Not Available | + | 492151 - 492444 | 11062.3 |
| cbs domain-containing protein | Q7C_RS02265 | Not Available | - | 492448 - 492900 | 17076.9 |
| fdhf/ydep family oxidoreductase | Q7C_RS02270 | Not Available | - | 493009 - 495309 | 84851.8 |
| peptide chain release factor 3 | Q7C_RS02275 | Not Available | - | 495596 - 497176 | 59671.4 |
| lexa family protein | Q7C_RS02280 | Not Available | - | 497433 - 498080 | 23492.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.