Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Piscirickettsiaceae
Genus
Methylophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Piscirickettsiaceae |
| Genus | Methylophaga |
| Species | Methylophaga frappieri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methylophaga frappieri str. JAM7
Accession NumberNC_017856.1
Gene Summary
Adenine Count
705888 bp
Thymine Count
702259 bp
Guanine Count
632271 bp
Cytosine Count
657047 bp
Genome Length
2697465 bp
Protein-coding Genes
2506 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| shikimate kinase arok | Q7C_RS08590 | Not Available | - | 1790725 - 1791261 | 20227.7 |
| type iv pilus secretin pilq | Q7C_RS08595 | Not Available | - | 1791355 - 1793478 | 77281.2 |
| pilus assembly protein pilp | Q7C_RS08600 | Not Available | - | 1793509 - 1794066 | 20746.8 |
| type 4a pilus biogenesis protein pilo | Q7C_RS08605 | Not Available | - | 1794063 - 1794650 | 22267.0 |
| piln domain-containing protein | Q7C_RS08610 | Not Available | - | 1794650 - 1795213 | 21683.1 |
| pilus assembly protein pilm | Q7C_RS08615 | Not Available | - | 1795213 - 1796274 | 38064.7 |
| penicillin-binding protein 1a | Q7C_RS08620 | Not Available | + | 1796464 - 1798893 | 89426.6 |
| m48 family metalloprotease | Q7C_RS08625 | Not Available | - | 1798896 - 1800398 | 55355.6 |
| 50s ribosomal protein l31 | Q7C_RS08630 | Not Available | - | 1800419 - 1800619 | 7410.77 |
| class i sam-dependent methyltransferase | Q7C_RS08635 | Not Available | - | 1800729 - 1801322 | 22127.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.