Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Piscirickettsiaceae
Genus
Methylophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Piscirickettsiaceae |
| Genus | Methylophaga |
| Species | Methylophaga frappieri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methylophaga frappieri str. JAM7
Accession NumberNC_017856.1
Gene Summary
Adenine Count
705888 bp
Thymine Count
702259 bp
Guanine Count
632271 bp
Cytosine Count
657047 bp
Genome Length
2697465 bp
Protein-coding Genes
2506 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l28 | Q7C_RS05650 | Not Available | + | 1215276 - 1215512 | 9042.0 |
| 50s ribosomal protein l33 | Q7C_RS05655 | Not Available | + | 1215526 - 1215681 | 6082.57 |
| eal and hdod domain-containing protein | Q7C_RS05660 | Not Available | + | 1215788 - 1216999 | 45413.2 |
| abc transporter atp-binding protein | Q7C_RS05665 | Not Available | + | 1217001 - 1217948 | 35198.3 |
| abc transporter permease subunit | Q7C_RS05670 | Not Available | + | 1217948 - 1218697 | 27215.5 |
| gldg family protein | Q7C_RS05675 | Not Available | + | 1218694 - 1220043 | 50524.5 |
| duf4340 domain-containing protein | Q7C_RS05680 | Not Available | + | 1220040 - 1220915 | 32645.7 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | Q7C_RS05685 | Not Available | + | 1220915 - 1221733 | 30673.5 |
| c-type cytochrome | Q7C_RS05690 | Not Available | - | 1221762 - 1222043 | 10132.4 |
| 23s rrna pseudouridine(1911/1915/1917) synthase rlud | Q7C_RS05695 | Not Available | + | 1222119 - 1223096 | 35959.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.