Mucilaginibacter paludis DSM 18603

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Mucilaginibacter

Description

Mucilaginibacter paludis DSM 18603 is a Gram-negative, rod-shaped bacterium that does not form spores and exhibits facultative aerobic/anaerobic metabolism. This microbe thrives optimally at a temperature of 25.0°C, indicating a preference for moderate environmental conditions. As a heterotroph, Mucilaginibacter paludis relies on organic compounds as its energy source, which suggests it plays a role in the decomposition of organic matter within its habitat. The facultative nature of its oxygen requirement allows Mucilaginibacter paludis to adapt to varying oxygen levels, making it versatile in different ecological niches. This adaptability may enable it to thrive in both oxygen-rich and oxygen-poor environments, contributing to its survival in diverse habitats, possibly including soils, sediments, or other organic-rich substrates. Understanding the metabolic capabilities and environmental tolerances of Mucilaginibacter paludis can provide insights into its potential roles in nutrient cycling and organic matter degradation in ecosystems where it is present. Its ability to function in varying oxygen conditions may also suggest a significant role in biogeochemical processes, particularly in environments that undergo periodic anoxia.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusMucilaginibacter
SpeciesMucilaginibacter paludis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceheterotroph
PathogenicityNot Available

Genome Summary

Mucilaginibacter paludis DSM 18603

Accession NumberAEIH00000000.2

Gene Summary

Adenine Count

2395948 bp

Thymine Count

2408374 bp

Guanine Count

1804390 bp

Cytosine Count

1799010 bp

Genome Length

8407722 bp

Protein-coding Genes

6951 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical protein [mucilaginibacter paludis]-Not Available+179 - 60116389.8
hypothetical protein [mucilaginibacter paludis]-Not Available+629 - 116220262.3
ph domain-containing protein [mucilaginibacter paludis]-Not Available-1816 - 234619716.9
flavodoxin family protein [mucilaginibacter paludis]-Not Available-2860 - 340519529.7
duf4914 family protein [mucilaginibacter paludis]-Not Available-3543 - 546571663.1
ferredoxin [mucilaginibacter paludis]-Not Available-5761 - 60069185.28
u32 family peptidase [mucilaginibacter paludis]-P59916-6011 - 724945361.7
hypothetical protein [mucilaginibacter paludis]-Not Available-7444 - 773110481.8
arac family transcriptional regulator [chryseobacterium arachidis]-Not Available-8087 - 897434172.8
aldo/keto reductase [chryseobacterium hispalense]-Not Available-8983 - 998736910.4

Displaying genes 1 – 10 of 14111 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

241 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001650N-acetyl-9-O-acetylneuraminateC13H20NO10Chemical structure of N-acetyl-9-O-acetylneuraminateNot available
Average350.301Da
Monoisotopic350.109269428Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001767oxalateC2O4Chemical structure of oxalateNot available
Average88.019Da
Monoisotopic87.979658488Da
BASm0001774tetradecanoateC14H27O2Chemical structure of tetradecanoateNot available
Average227.363Da
Monoisotopic227.2011051Da
BASm0001775(9Z)-octadecenoateC18H33O2Chemical structure of (9Z)-octadecenoateNot available
Average281.4534Da
Monoisotopic281.2480553Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da
BASm0001789(3R)-citramalateC5H6O5Chemical structure of (3R)-citramalateNot available
Average146.099Da
Monoisotopic146.0226205Da
BASm0001842(5Z,8Z,11Z,14Z)-eicosatetraenoateC20H31O2Chemical structure of (5Z,8Z,11Z,14Z)-eicosatetraenoateNot available
Average303.467Da
Monoisotopic303.2329538Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0001921(S)-3-methyl-2-oxopentanoateC6H9O3Chemical structure of (S)-3-methyl-2-oxopentanoate1460-34-0
Average129.1339Da
Monoisotopic129.0551692Da

Displaying 41–50 of 241 metabolites