Mucilaginibacter paludis DSM 18603

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Mucilaginibacter

Description

Mucilaginibacter paludis DSM 18603 is a Gram-negative, rod-shaped bacterium that does not form spores and exhibits facultative aerobic/anaerobic metabolism. This microbe thrives optimally at a temperature of 25.0°C, indicating a preference for moderate environmental conditions. As a heterotroph, Mucilaginibacter paludis relies on organic compounds as its energy source, which suggests it plays a role in the decomposition of organic matter within its habitat. The facultative nature of its oxygen requirement allows Mucilaginibacter paludis to adapt to varying oxygen levels, making it versatile in different ecological niches. This adaptability may enable it to thrive in both oxygen-rich and oxygen-poor environments, contributing to its survival in diverse habitats, possibly including soils, sediments, or other organic-rich substrates. Understanding the metabolic capabilities and environmental tolerances of Mucilaginibacter paludis can provide insights into its potential roles in nutrient cycling and organic matter degradation in ecosystems where it is present. Its ability to function in varying oxygen conditions may also suggest a significant role in biogeochemical processes, particularly in environments that undergo periodic anoxia.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusMucilaginibacter
SpeciesMucilaginibacter paludis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceheterotroph
PathogenicityNot Available

Genome Summary

Mucilaginibacter paludis DSM 18603

Accession NumberAEIH00000000.2

Gene Summary

Adenine Count

2395948 bp

Thymine Count

2408374 bp

Guanine Count

1804390 bp

Cytosine Count

1799010 bp

Genome Length

8407722 bp

Protein-coding Genes

6951 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical protein [mucilaginibacter paludis]-Not Available+179 - 60116389.8
hypothetical protein [mucilaginibacter paludis]-Not Available+629 - 116220262.3
ph domain-containing protein [mucilaginibacter paludis]-Not Available-1816 - 234619716.9
flavodoxin family protein [mucilaginibacter paludis]-Not Available-2860 - 340519529.7
duf4914 family protein [mucilaginibacter paludis]-Not Available-3543 - 546571663.1
ferredoxin [mucilaginibacter paludis]-Not Available-5761 - 60069185.28
u32 family peptidase [mucilaginibacter paludis]-P59916-6011 - 724945361.7
hypothetical protein [mucilaginibacter paludis]-Not Available-7444 - 773110481.8
arac family transcriptional regulator [chryseobacterium arachidis]-Not Available-8087 - 897434172.8
aldo/keto reductase [chryseobacterium hispalense]-Not Available-8983 - 998736910.4

Displaying genes 1 – 10 of 14111 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

241 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm0001254naphthalene-1,3,6,8-tetrolC10H8O4Chemical structure of naphthalene-1,3,6,8-tetrolNot available
Average192.17Da
Monoisotopic192.042258738Da
BASm0001279(6S)-5-methyl-5,6,7,8-tetrahydrofolateC20H23N7O6Chemical structure of (6S)-5-methyl-5,6,7,8-tetrahydrofolateNot available
Average457.4399Da
Monoisotopic457.1709815Da
BASm0001327L-fuconateC6H11O6Chemical structure of L-fuconateNot available
Average179.149Da
Monoisotopic179.0561117Da
BASm0001330N-acetyl-D-hexosamineC8H15NO6Chemical structure of N-acetyl-D-hexosamineNot available
Average221.209Da
Monoisotopic221.089937207Da
BASm0001362octadecanoateC18H35O2Chemical structure of octadecanoateNot available
Average283.4693Da
Monoisotopic283.263705364Da
BASm0001415beta-L-rhamnoseC6H12O5Chemical structure of beta-L-rhamnoseNot available
Average164.1565Da
Monoisotopic164.0684735Da
BASm0001418D-alluloseC6H12O6Chemical structure of D-allulose551-68-8
Average180.1559Da
Monoisotopic180.0633881Da
BASm0001429decanoateC10H19O2Chemical structure of decanoateNot available
Average171.2567Da
Monoisotopic171.138504852Da
BASm0001463alpha-L-rhamnoseC6H12O5Chemical structure of alpha-L-rhamnose3615-41-6
Average164.1565Da
Monoisotopic164.068473494Da

Displaying 31–40 of 241 metabolites