Mucilaginibacter paludis DSM 18603

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Mucilaginibacter

Description

Mucilaginibacter paludis DSM 18603 is a Gram-negative, rod-shaped bacterium that does not form spores and exhibits facultative aerobic/anaerobic metabolism. This microbe thrives optimally at a temperature of 25.0°C, indicating a preference for moderate environmental conditions. As a heterotroph, Mucilaginibacter paludis relies on organic compounds as its energy source, which suggests it plays a role in the decomposition of organic matter within its habitat. The facultative nature of its oxygen requirement allows Mucilaginibacter paludis to adapt to varying oxygen levels, making it versatile in different ecological niches. This adaptability may enable it to thrive in both oxygen-rich and oxygen-poor environments, contributing to its survival in diverse habitats, possibly including soils, sediments, or other organic-rich substrates. Understanding the metabolic capabilities and environmental tolerances of Mucilaginibacter paludis can provide insights into its potential roles in nutrient cycling and organic matter degradation in ecosystems where it is present. Its ability to function in varying oxygen conditions may also suggest a significant role in biogeochemical processes, particularly in environments that undergo periodic anoxia.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusMucilaginibacter
SpeciesMucilaginibacter paludis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceheterotroph
PathogenicityNot Available

Genome Summary

Mucilaginibacter paludis DSM 18603

Accession NumberAEIH00000000.2

Gene Summary

Adenine Count

2395948 bp

Thymine Count

2408374 bp

Guanine Count

1804390 bp

Cytosine Count

1799010 bp

Genome Length

8407722 bp

Protein-coding Genes

6951 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical protein [mucilaginibacter paludis]-Not Available+179 - 60116389.8
hypothetical protein [mucilaginibacter paludis]-Not Available+629 - 116220262.3
ph domain-containing protein [mucilaginibacter paludis]-Not Available-1816 - 234619716.9
flavodoxin family protein [mucilaginibacter paludis]-Not Available-2860 - 340519529.7
duf4914 family protein [mucilaginibacter paludis]-Not Available-3543 - 546571663.1
ferredoxin [mucilaginibacter paludis]-Not Available-5761 - 60069185.28
u32 family peptidase [mucilaginibacter paludis]-P59916-6011 - 724945361.7
hypothetical protein [mucilaginibacter paludis]-Not Available-7444 - 773110481.8
arac family transcriptional regulator [chryseobacterium arachidis]-Not Available-8087 - 897434172.8
aldo/keto reductase [chryseobacterium hispalense]-Not Available-8983 - 998736910.4

Displaying genes 1 – 10 of 14111 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

241 records
Metabolite IDMetabolite nameStructureCAS number
BASm00007052-dehydro-3-deoxy-D-arabinonateC5H7O5Chemical structure of 2-dehydro-3-deoxy-D-arabinonateNot available
Average147.107Da
Monoisotopic147.0298969Da
BASm00007164-methylsulfanyl-2-oxobutanoateC5H7O3SChemical structure of 4-methylsulfanyl-2-oxobutanoateNot available
Average147.17Da
Monoisotopic147.012138839Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0000950L-xyluloseC5H10O5Chemical structure of L-xylulose527-50-4
Average150.1299Da
Monoisotopic150.05282343Da
BASm0000976enol-oxaloacetateC4H2O5Chemical structure of enol-oxaloacetateNot available
Average130.056Da
Monoisotopic129.9913203Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00011184-(dimethylamino)azobenzeneC14H15N3Chemical structure of 4-(dimethylamino)azobenzeneNot available
Average225.295Da
Monoisotopic225.1265975Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm00011795-hydroxyisourateC5H4N4O4Chemical structure of 5-hydroxyisourateNot available
Average184.1097Da
Monoisotopic184.0232546Da

Displaying 21–30 of 241 metabolites