Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | CUU_1804 | Not Available | - | 1157522 - 1158109 | 22219.0 |
| conserved hypothetical protein | CUU_1805 | Not Available | - | 1158139 - 1158387 | 9849.92 |
| 2-isopropylmalate synthase | CUU_3914 | Not Available | + | 1159759 - 1161255 | 54450.0 |
| 3-isopropylmalate dehydratase, large subunit | CUU_3915 | Not Available | + | 1161273 - 1162655 | 50049.1 |
| 3-isopropylmalate dehydratase, small subunit | CUU_3916 | Not Available | + | 1162669 - 1163265 | 22479.6 |
| hmgl-like protein | CUU_3917 | Not Available | + | 1163244 - 1164791 | 57810.4 |
| 3-isopropylmalate dehydrogenase | CUU_3918 | Not Available | + | 1164885 - 1165946 | 39089.9 |
| thioredoxin | CUU_3919 | Not Available | + | 1166063 - 1167223 | 43505.3 |
| peptide-methionine (s)-s-oxide reductase | CUU_3920 | Not Available | - | 1167292 - 1167600 | 12126.2 |
| virulence-associated protein e | CUU_4020 | Not Available | + | 1167829 - 1168980 | 45216.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
