Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor | CUU_1764 | Not Available | + | 1105009 - 1105569 | 22126.4 |
| sigma factor regulatory protein, fecr/pupr family | CUU_1765 | Not Available | + | 1105642 - 1106586 | 36240.7 |
| tonb-dependent receptor plug domain protein | CUU_1766 | Not Available | + | 1106737 - 1108365 | 59401.1 |
| tonb-dependent receptor | CUU_1767 | Not Available | + | 1108477 - 1110015 | 58522.3 |
| putative lipoprotein | CUU_1768 | Not Available | + | 1110028 - 1111770 | 67438.7 |
| o-glycosyl hydrolase family 30 | CUU_1769 | Not Available | + | 1111876 - 1113384 | 57900.6 |
| glycosyl hydrolase, family 43 | CUU_1770 | Not Available | + | 1113578 - 1115521 | 73204.7 |
| carbohydrate binding domain protein | CUU_1771 | Not Available | + | 1115549 - 1118047 | 92442.4 |
| glycosyl hydrolase family 35 | CUU_1772 | Not Available | + | 1118064 - 1120412 | 88340.8 |
| transcriptional regulator, arac family | CUU_1773 | Not Available | + | 1120610 - 1123450 | 108421.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
