Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative phenylacetic acid degradation protein paad | CUU_3699 | Not Available | - | 1046873 - 1047283 | 14751.8 |
| conserved hypothetical protein | CUU_3700 | Not Available | - | 1047311 - 1048399 | 41096.4 |
| putative s-adenosylmethionine:trna ribosyltransferase-isomerase | CUU_3701 | Not Available | + | 1048464 - 1049681 | 46273.2 |
| urocanate hydratase | CUU_3702 | Not Available | + | 1050207 - 1052204 | 74524.0 |
| glutamate formimidoyltransferase | CUU_3703 | Not Available | + | 1052287 - 1053189 | 33347.3 |
| conserved hypothetical protein | CUU_3704 | Not Available | + | 1053207 - 1053593 | 15210.3 |
| imidazolonepropionase | CUU_3705 | Not Available | + | 1053649 - 1054893 | 44903.3 |
| formiminotransferase-cyclodeaminase | CUU_3706 | Not Available | + | 1054914 - 1055537 | 22967.8 |
| histidine ammonia-lyase | CUU_3707 | Not Available | + | 1055572 - 1057068 | 55179.9 |
| hydrolase, nudix family | CUU_3708 | Not Available | + | 1057187 - 1057687 | 18986.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
