Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein | CUU_2872 | Not Available | + | 621875 - 623860 | 74507.4 |
| hydrolase coce/nond family protein | CUU_2873 | Not Available | - | 624008 - 625915 | 73920.9 |
| hydrolyase, tartrate beta subunit/fumarate domain protein, fe-s type | CUU_2874 | Not Available | + | 626054 - 627697 | 60487.7 |
| alpha-n-acetylglucosaminidase (naglu) | CUU_2875 | Not Available | + | 627818 - 629956 | 82064.5 |
| amino acid permease | CUU_2876 | Not Available | - | 630129 - 631787 | 59770.4 |
| outer membrane efflux protein | CUU_2877 | Not Available | - | 631876 - 633195 | 50562.7 |
| rnd transporter, hydrophobe/amphiphile efflux-1 (hae1) family protein | CUU_2878 | Not Available | - | 633192 - 636227 | 112085.0 |
| efflux transporter, rnd family, mfp subunit | CUU_2879 | Not Available | - | 636247 - 637323 | 39714.1 |
| peptidase, m28 family | CUU_2880 | Not Available | - | 637410 - 638429 | 38289.7 |
| ribosome small subunit-dependent gtpase a | CUU_2881 | Not Available | - | 638443 - 639375 | 35098.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
