Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ll-diaminopimelate aminotransferase | CUU_3431 | Not Available | + | 534395 - 535624 | 45848.8 |
| conserved hypothetical protein | CUU_3432 | Not Available | + | 535749 - 536468 | 25446.5 |
| nitrogen regulatory protein p-ii | CUU_3433 | Not Available | + | 536586 - 536942 | 13455.3 |
| ammonium transporter | CUU_3434 | Not Available | + | 537039 - 538376 | 46889.4 |
| glutamine synthetase, catalytic domain protein | CUU_3435 | Not Available | + | 538439 - 540628 | 81973.6 |
| glutamine-fructose-6-phosphate transaminase (isomerizing) | CUU_3436 | Not Available | + | 540942 - 542786 | 67688.4 |
| class ii glutamine amidotransferase | CUU_3437 | Not Available | + | 542945 - 544828 | 71341.8 |
| carbamoyl-phosphate synthase, small subunit | CUU_3438 | Not Available | + | 544854 - 545930 | 39980.6 |
| carbamoyl-phosphate synthase, large subunit | CUU_3439 | Not Available | + | 545954 - 549181 | 119805.0 |
| pas domain s-box | CUU_3440 | Not Available | + | 549349 - 551694 | 89810.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
