Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc, b subunit | CUU_1421 | Not Available | + | 4388552 - 4390585 | 77685.6 |
| conserved domain protein | CUU_1423 | Not Available | + | 4390596 - 4390769 | 6300.59 |
| phosphate-selective porin o and p | CUU_1422 | Not Available | - | 4390752 - 4391765 | 38650.1 |
| uncharacterized protein, yigz family | CUU_1424 | Not Available | - | 4391956 - 4392558 | 22823.7 |
| exonuclease | CUU_1425 | Not Available | - | 4392592 - 4393080 | 18589.9 |
| phospholipase, patatin family | CUU_1427 | Not Available | + | 4393288 - 4395498 | 81953.5 |
| mannonate dehydratase | CUU_1426 | Not Available | - | 4395481 - 4396659 | 44737.9 |
| pullulanase, type i | CUU_1428 | Not Available | - | 4396717 - 4398711 | 74697.4 |
| crossover junction endodeoxyribonuclease ruvc | CUU_1429 | Not Available | - | 4398716 - 4399285 | 21117.3 |
| conserved hypothetical protein | CUU_1430 | Not Available | - | 4399282 - 4399587 | 11925.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
