Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative rna polymerase-binding protein dksa | CUU_1401 | Not Available | - | 4363494 - 4363874 | 14347.1 |
| isoleucine--trna ligase | CUU_1402 | Not Available | - | 4363898 - 4367386 | 132205.0 |
| transcriptional regulator, arac family | CUU_1403 | Not Available | - | 4367595 - 4368428 | 32094.1 |
| peptidase, m48 family | CUU_1404 | Not Available | - | 4368928 - 4369746 | 29692.7 |
| kdpg and khg aldolase | CUU_1405 | Not Available | - | 4370000 - 4370731 | 26348.3 |
| kinase, pfkb family | CUU_1406 | Not Available | - | 4370784 - 4371806 | 37020.8 |
| transcriptional regulator, laci family | CUU_1407 | Not Available | + | 4372051 - 4373124 | 41131.5 |
| d-galactarate dehydratase/altronate hydrolase, c-terminal domain protein | CUU_1408 | Not Available | + | 4373146 - 4374636 | 54186.1 |
| na+/h+ antiporter family protein | CUU_1409 | Not Available | + | 4374782 - 4376086 | 46607.5 |
| conserved hypothetical protein | CUU_1410 | Not Available | - | 4376263 - 4377093 | 31663.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
