Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribonucleoside-diphosphate reductase, beta subunit | CUU_1360 | Not Available | + | 4323788 - 4324837 | 41348.8 |
| methylenetetrahydrofolate reductase (nad(p)h) | CUU_1361 | Not Available | - | 4324928 - 4325881 | 35944.1 |
| tonb-dependent receptor | CUU_1362 | Not Available | - | 4326178 - 4328481 | 85921.1 |
| hypothetical protein | CUU_1363 | Not Available | + | 4328648 - 4328785 | 4818.66 |
| conserved hypothetical protein | CUU_1364 | Not Available | - | 4329078 - 4329266 | 7382.66 |
| tonb-dependent receptor plug domain protein | CUU_1366 | Not Available | + | 4329410 - 4331587 | 81237.5 |
| periplasmic binding protein | CUU_1367 | Not Available | + | 4331601 - 4332758 | 43496.5 |
| putative 1-deoxy-d-xylulose-5-phosphate synthase | CUU_1368 | Not Available | - | 4332899 - 4334626 | 63421.2 |
| transcriptional regulator, arac family | CUU_1369 | Not Available | - | 4334813 - 4335700 | 34136.2 |
| transcriptional regulator, arac family | CUU_1370 | Not Available | - | 4335732 - 4336643 | 35539.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
