Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | + | 4297391 - 4297466 | Not Available |
| cobalamin biosynthesis protein cobd | CUU_1336 | Not Available | - | 4297502 - 4298434 | 34515.9 |
| putative threonine-phosphate decarboxylase | CUU_1337 | Not Available | - | 4298416 - 4299426 | 38859.8 |
| cobyric acid synthase cobq | CUU_1338 | Not Available | - | 4299419 - 4300909 | 55371.6 |
| atp:cob(i)alamin adenosyltransferase | CUU_1339 | Not Available | - | 4300909 - 4301493 | 22507.2 |
| cobyrinic acid a,c-diamide synthase | CUU_1340 | Not Available | - | 4301481 - 4302809 | 49093.6 |
| trka-c domain protein | CUU_1341 | Not Available | + | 4303045 - 4304733 | 60780.7 |
| tonb-dependent receptor | CUU_1343 | Not Available | + | 4305126 - 4307303 | 81301.7 |
| tonb-dependent receptor | CUU_1345 | Not Available | + | 4307677 - 4309737 | 78366.5 |
| cobalt chelatase (cbik) | CUU_1346 | Not Available | + | 4309771 - 4310967 | 45142.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
