Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin | CUU_0493 | Not Available | - | 4208301 - 4208597 | 11331.9 |
| outer membrane protein | CUU_0494 | Not Available | - | 4208716 - 4209342 | 23586.1 |
| conserved hypothetical protein | CUU_0495 | Not Available | - | 4209353 - 4209580 | 8190.17 |
| xaa-his dipeptidase | CUU_0496 | Not Available | + | 4209802 - 4211259 | 53122.6 |
| endonuclease/exonuclease/phosphatase family protein | CUU_0497 | Not Available | + | 4211265 - 4212275 | 38170.7 |
| putative rrna large subunit m3psi methyltransferase rlmh | CUU_0498 | Not Available | - | 4212352 - 4212825 | 18383.5 |
| nicotinate-nucleotide diphosphorylase (carboxylating) | CUU_0499 | Not Available | + | 4212906 - 4213757 | 31226.1 |
| transcriptional regulator, arac family | CUU_0500 | Not Available | - | 4213862 - 4216681 | 107456.0 |
| tonb-dependent receptor plug domain protein | CUU_0501 | Not Available | + | 4216999 - 4219944 | 107405.0 |
| hypothetical protein | CUU_0502 | Not Available | - | 4220900 - 4221361 | 16871.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
