Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| efflux abc transporter, permease protein | CUU_0473 | Not Available | + | 4187371 - 4188642 | 48154.1 |
| efflux abc transporter, permease protein | CUU_0474 | Not Available | + | 4188665 - 4189921 | 47308.6 |
| efflux abc transporter, permease protein | CUU_0475 | Not Available | + | 4189959 - 4191179 | 46885.6 |
| outer membrane efflux protein | CUU_0476 | Not Available | + | 4191333 - 4192817 | 56980.8 |
| response regulator receiver domain protein | CUU_0477 | Not Available | + | 4192903 - 4194258 | 50708.5 |
| sensor histidine kinase/response regulator | CUU_0478 | Not Available | + | 4194281 - 4195576 | 49040.2 |
| hypothetical protein | CUU_0479 | Not Available | + | 4196619 - 4196825 | 7512.93 |
| conserved hypothetical protein | CUU_0480 | Not Available | + | 4196894 - 4197031 | 5399.45 |
| transglycosylase slt domain protein | CUU_0481 | Not Available | - | 4197047 - 4198387 | 50553.1 |
| uridine kinase | CUU_0482 | Not Available | - | 4198423 - 4199034 | 23271.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
