Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l-arabinose isomerase | CUU_0443 | Not Available | - | 4154743 - 4156272 | 57229.3 |
| l-ribulose-5-phosphate 4-epimerase | CUU_0444 | Not Available | - | 4156312 - 4156998 | 24994.8 |
| hydrolase, nudix family | CUU_0445 | Not Available | - | 4157069 - 4157746 | 26233.5 |
| transporter, sss family | CUU_0446 | Not Available | - | 4157822 - 4159564 | 64455.8 |
| aldose 1-epimerase | CUU_0447 | Not Available | - | 4159591 - 4160745 | 41965.6 |
| galactokinase | CUU_0448 | Not Available | - | 4160942 - 4162096 | 42994.0 |
| transporter, major facilitator family protein | CUU_0449 | Not Available | - | 4162137 - 4163477 | 47498.5 |
| aldose 1-epimerase | CUU_0450 | Not Available | - | 4163524 - 4164618 | 39972.6 |
| bifunctional protein folc | CUU_0451 | Not Available | - | 4164713 - 4165999 | 48022.5 |
| chaperone protein dnaj | CUU_0452 | Not Available | - | 4166094 - 4167269 | 42201.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
