Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | CUU_0403 | Not Available | - | 4104669 - 4105853 | 45074.7 |
| transcription-repair coupling factor | CUU_0404 | Not Available | + | 4105889 - 4109326 | 130181.0 |
| tonb family c-terminal domain protein | CUU_0405 | Not Available | + | 4109591 - 4110271 | 25436.6 |
| hydrolase, carbon-nitrogen family | CUU_0406 | Not Available | + | 4110463 - 4111224 | 28511.8 |
| putative indolepyruvate ferredoxin oxidoreductase, alpha subunit | CUU_0407 | Not Available | + | 4111248 - 4112864 | 58832.5 |
| putative indolepyruvate ferredoxin oxidoreductase, beta subunit | CUU_0408 | Not Available | + | 4112861 - 4113442 | 21245.8 |
| aminotransferase, class i/ii | CUU_0409 | Not Available | + | 4113447 - 4114751 | 48672.3 |
| phenylacetate-coenzyme a ligase family protein | CUU_0410 | Not Available | + | 4114846 - 4116147 | 48582.5 |
| act domain protein | CUU_0411 | Not Available | + | 4116161 - 4116577 | 15370.7 |
| swim zinc finger protein | CUU_0412 | Not Available | + | 4116819 - 4118597 | 69140.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
