Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase, family 43 | CUU_1525 | Not Available | - | 4009045 - 4010709 | 61567.8 |
| putative lipoprotein | CUU_1526 | Not Available | - | 4010723 - 4011937 | 45677.1 |
| polygalacturonase (pectinase) | CUU_1527 | Not Available | - | 4012076 - 4013695 | 59176.8 |
| putative enoyl-(acyl-carrier-protein) reductase | CUU_1528 | Not Available | + | 4014072 - 4014929 | 31326.5 |
| putative lipoprotein | CUU_1529 | Not Available | + | 4014940 - 4015938 | 38744.0 |
| tetrapyrrole methylase family protein | CUU_1530 | Not Available | + | 4015959 - 4016666 | 26154.2 |
| conserved hypothetical protein | CUU_1531 | Not Available | - | 4016682 - 4017188 | 19518.7 |
| putative lipoyl synthase | CUU_1532 | Not Available | - | 4017729 - 4018610 | 32776.6 |
| putative prolyl dipeptidyl peptidase | CUU_1533 | Not Available | - | 4018681 - 4020882 | 83440.0 |
| radical sam protein, tigr01212 family | CUU_1534 | Not Available | + | 4020933 - 4021895 | 37042.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
