Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor | CUU_1727 | Not Available | - | 3859496 - 3860089 | 23169.2 |
| putative crispr-associated protein csc1 | CUU_1728 | Not Available | - | 3860117 - 3861751 | 61961.7 |
| trka-c domain protein | CUU_1729 | Not Available | - | 3861867 - 3863537 | 60144.9 |
| methylmalonyl-coa mutase, small subunit | CUU_1730 | Not Available | + | 3863823 - 3865733 | 70522.5 |
| methylmalonyl-coa mutase | CUU_1731 | Not Available | + | 3865743 - 3867893 | 79111.7 |
| putative lipoprotein | CUU_1732 | Not Available | - | 3868216 - 3869706 | 55874.7 |
| tonb-dependent receptor | CUU_1733 | Not Available | - | 3869720 - 3872965 | 119636.0 |
| conserved domain protein | CUU_3546 | Not Available | + | 3873366 - 3873536 | 6809.09 |
| conserved hypothetical protein | CUU_3547 | Not Available | + | 3874063 - 3875613 | 60711.2 |
| conserved hypothetical protein | CUU_3548 | Not Available | - | 3875751 - 3879071 | 125877.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
