Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polyphosphate kinase 1 | CUU_1717 | Not Available | - | 3838499 - 3840553 | 80495.5 |
| phosphodiesterase family protein | CUU_1718 | Not Available | + | 3840611 - 3841108 | 18707.5 |
| dtdp-glucose 4,6-dehydratase | CUU_1719 | Not Available | + | 3841157 - 3842296 | 43738.0 |
| tonb-dependent receptor plug domain protein | CUU_1720 | Not Available | + | 3842767 - 3845859 | 115070.0 |
| putative lipoprotein | CUU_1721 | Not Available | + | 3845872 - 3847689 | 68245.8 |
| beta galactosidase small chain | CUU_1722 | Not Available | - | 3847876 - 3851106 | 122517.0 |
| alpha,alpha-trehalase | CUU_1723 | Not Available | - | 3851162 - 3853231 | 78010.4 |
| putative lipoprotein | CUU_1724 | Not Available | - | 3853263 - 3854798 | 58902.3 |
| tonb-dependent receptor plug domain protein | CUU_1725 | Not Available | - | 3854819 - 3858163 | 123553.0 |
| sigma factor regulatory protein, fecr/pupr family | CUU_1726 | Not Available | - | 3858380 - 3859366 | 38650.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
