Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein | CUU_1677 | Not Available | + | 3796362 - 3796691 | 12795.0 |
| phosphoadenosine phosphosulfate reductase family protein | CUU_1678 | Not Available | + | 3796684 - 3797985 | 52313.9 |
| parb-like protein | CUU_1679 | Not Available | + | 3797982 - 3798494 | 19744.9 |
| conserved hypothetical protein | CUU_1680 | Not Available | + | 3798549 - 3800306 | 64154.3 |
| malate dehydrogenase, nad-dependent | CUU_1681 | Not Available | - | 3800404 - 3801345 | 32849.0 |
| conserved hypothetical protein | CUU_1683 | Not Available | + | 3801502 - 3802374 | 33451.4 |
| hypothetical protein | CUU_1682 | Not Available | - | 3802361 - 3802585 | 8880.22 |
| outer membrane efflux protein | CUU_1684 | Not Available | + | 3802590 - 3804053 | 53453.8 |
| auxiliary transport protein, membrane fusion protein (mfp) family protein | CUU_1685 | Not Available | + | 3804080 - 3805066 | 35945.9 |
| putative transporter | CUU_1686 | Not Available | + | 3805073 - 3806248 | 44285.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
