Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| na/pi-cotransporter ii-like protein | CUU_1580 | Not Available | + | 3685135 - 3686826 | 62887.8 |
| conserved hypothetical protein | CUU_1581 | Not Available | + | 3686898 - 3687392 | 18970.9 |
| peptidyl-prolyl cis-trans isomerase, fkbp-type | CUU_1582 | Not Available | - | 3687471 - 3688337 | 31372.7 |
| peptidyl-prolyl cis-trans isomerase, fkbp-type | CUU_1583 | Not Available | - | 3688359 - 3688943 | 21446.7 |
| transcriptional regulator, sir2 family | CUU_1584 | Not Available | + | 3688990 - 3689769 | 28850.9 |
| rubredoxin | CUU_1585 | Not Available | + | 3689844 - 3690008 | 5868.75 |
| polyribonucleotide nucleotidyltransferase | CUU_1586 | Not Available | - | 3690193 - 3692379 | 80746.4 |
| antioxidant, ahpc/tsa family | CUU_1587 | Not Available | + | 3692544 - 3693692 | 42886.3 |
| putative transcription elongation factor grea | CUU_1588 | Not Available | + | 3693893 - 3694357 | 16780.4 |
| histidine triad domain protein | CUU_1589 | Not Available | + | 3694409 - 3694816 | 15026.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
