Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | CUU_1570 | Not Available | - | 3673915 - 3675759 | 68190.6 |
| phosphoribosylaminoimidazole carboxylase, catalytic subunit | CUU_1571 | Not Available | - | 3675843 - 3676352 | 17745.0 |
| glycine cleavage system h protein | CUU_1572 | Not Available | - | 3676477 - 3676857 | 14151.4 |
| putative membrane protein | CUU_1573 | Not Available | - | 3676894 - 3677550 | 24809.8 |
| rna polymerase sigma-54 factor | CUU_1574 | Not Available | - | 3677561 - 3679030 | 56144.2 |
| conserved domain protein | CUU_1575 | Not Available | + | 3679159 - 3679389 | 8754.29 |
| conserved hypothetical protein | CUU_1576 | Not Available | + | 3679622 - 3679738 | 4611.31 |
| glycyl-radical enzyme activating family protein | CUU_1577 | Not Available | - | 3679739 - 3680647 | 33564.0 |
| putative pyruvate formate-lyase | CUU_1578 | Not Available | - | 3680652 - 3683078 | 91952.5 |
| phosphoribulokinase/uridine kinase family protein | CUU_1579 | Not Available | - | 3683380 - 3685044 | 64379.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
