Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative lipoprotein | CUU_3985 | Not Available | - | 3583616 - 3585157 | 58745.9 |
| tonb-dependent receptor plug domain protein | CUU_3986 | Not Available | - | 3585158 - 3588083 | 108593.0 |
| transposase, is4 family | CUU_4025 | Not Available | - | 3588123 - 3589286 | 45681.0 |
| conserved hypothetical protein | CUU_3834 | Not Available | + | 3589477 - 3589602 | 4767.77 |
| signal peptidase i | CUU_3835 | Not Available | + | 3589599 - 3590420 | 32028.7 |
| conserved hypothetical protein | CUU_3836 | Not Available | + | 3590574 - 3591116 | 19666.0 |
| hypothetical protein | CUU_3837 | Not Available | + | 3591106 - 3591225 | 4555.61 |
| efflux transporter, outer membrane factor lipoprotein, nodt family | CUU_3838 | Not Available | + | 3591248 - 3592645 | 51961.1 |
| efflux transporter, rnd family, mfp subunit | CUU_3839 | Not Available | + | 3592700 - 3593830 | 41388.6 |
| rnd transporter, hydrophobe/amphiphile efflux-1 (hae1) family protein | CUU_3840 | Not Available | + | 3593835 - 3596951 | 112560.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
