Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hydrolase, nudix family | CUU_3894 | Not Available | + | 3570404 - 3570958 | 21545.7 |
| methyltransferase domain protein | CUU_3895 | Not Available | - | 3571065 - 3571853 | 29803.5 |
| acetyltransferase, gnat family | CUU_3896 | Not Available | - | 3572125 - 3572580 | 17365.2 |
| beta-lactamase | CUU_3897 | Not Available | - | 3572635 - 3573594 | 36130.5 |
| glycosyl hydrolase, family 15 | CUU_3898 | Not Available | - | 3573653 - 3575440 | 69867.9 |
| trehalose-phosphatase | CUU_3899 | Not Available | - | 3575459 - 3577711 | 86642.4 |
| aspartate kinase | CUU_3900 | Not Available | + | 3578072 - 3579418 | 50720.7 |
| transposase, is4 family | CUU_4018 | Not Available | + | 3579622 - 3581133 | 59205.8 |
| site-specific recombinase, phage integrase family | CUU_4012 | Not Available | - | 3581843 - 3583003 | 44958.7 |
| hypothetical protein | CUU_4013 | Not Available | + | 3583386 - 3583570 | 6322.89 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
