Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5-formyltetrahydrofolate cyclo-ligase | CUU_2992 | Not Available | - | 3407984 - 3408444 | 17837.3 |
| peptidase, s41 family | CUU_2993 | Not Available | - | 3408437 - 3410158 | 63789.3 |
| cytidine and deoxycytidylate deaminase zinc-binding region | CUU_2994 | Not Available | - | 3410200 - 3410634 | 16211.4 |
| putative lipoprotein | CUU_2995 | Not Available | - | 3410639 - 3411133 | 18544.7 |
| peptidase family m3 | CUU_2996 | Not Available | - | 3411147 - 3413189 | 77751.2 |
| cyclic nucleotide-binding domain protein | CUU_2997 | Not Available | - | 3413347 - 3414024 | 26004.6 |
| conserved hypothetical protein tigr00427 | CUU_2998 | Not Available | + | 3414212 - 3414814 | 22140.0 |
| apbe family protein | CUU_2999 | Not Available | - | 3414973 - 3415962 | 36710.1 |
| membrane family protein | CUU_3000 | Not Available | - | 3416002 - 3416574 | 21225.7 |
| conserved hypothetical protein | CUU_3001 | Not Available | - | 3416578 - 3417225 | 24461.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
