Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase, family 43 | CUU_3587 | Not Available | + | 3353302 - 3354885 | 60270.6 |
| conserved hypothetical protein | CUU_3588 | Not Available | + | 3354898 - 3357492 | 99400.7 |
| alpha-glucuronidase | CUU_3589 | Not Available | + | 3357489 - 3359534 | 77255.2 |
| glycosyl hydrolase family 2, sugar binding domain protein | CUU_3590 | Not Available | + | 3359586 - 3361499 | 71568.4 |
| putative lipoprotein | CUU_3591 | Not Available | - | 3361531 - 3362562 | 39226.1 |
| tonb-dependent receptor plug domain protein | CUU_3592 | Not Available | - | 3362569 - 3365244 | 102190.0 |
| sigma factor regulatory protein, fecr/pupr family | CUU_3593 | Not Available | - | 3365252 - 3366142 | 33758.5 |
| putative lipoprotein | CUU_3594 | Not Available | - | 3366169 - 3366576 | 15515.8 |
| rna polymerase sigma-70 factor | CUU_3595 | Not Available | - | 3366632 - 3367198 | 22672.8 |
| putative lipoprotein | CUU_3596 | Not Available | - | 3367311 - 3368297 | 38261.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
