Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CUU_2280 | Not Available | + | 2501459 - 2501826 | 14649.7 |
| sensor histidine kinase/response regulator | CUU_1065 | Not Available | + | 2501907 - 2503805 | 71322.0 |
| 5'-nucleotidase, c-terminal domain protein | CUU_1066 | Not Available | + | 2503817 - 2505559 | 65563.7 |
| conserved hypothetical protein | CUU_1067 | Not Available | + | 2505789 - 2505902 | 4365.48 |
| tonb-dependent receptor | CUU_1068 | Not Available | + | 2506034 - 2508367 | 87137.7 |
| kama family protein | CUU_1069 | Not Available | - | 2508456 - 2510567 | 81983.3 |
| conserved hypothetical protein | CUU_1070 | Not Available | + | 2510887 - 2514198 | 126760.0 |
| bacterial alpha-l-rhamnosidase | CUU_1071 | Not Available | + | 2514250 - 2517006 | 104331.0 |
| polygalacturonase (pectinase) | CUU_1072 | Not Available | + | 2517064 - 2518404 | 49800.1 |
| conserved hypothetical protein | CUU_1073 | Not Available | + | 2518413 - 2519753 | 49757.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
