Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| heparinase ii/iii-like protein | CUU_1055 | Not Available | - | 2391415 - 2394153 | 102960.0 |
| conserved hypothetical protein | CUU_1056 | Not Available | - | 2394243 - 2395844 | 60317.0 |
| glycosyl hydrolase family 3 c-terminal domain protein | CUU_1057 | Not Available | + | 2395980 - 2398346 | 87829.0 |
| putative alpha-1,2-mannosidase | CUU_1058 | Not Available | - | 2398500 - 2401925 | 130581.0 |
| conserved hypothetical protein | CUU_1059 | Not Available | - | 2401922 - 2403859 | 73833.8 |
| putative lipoprotein | CUU_1060 | Not Available | - | 2404008 - 2405834 | 68526.6 |
| tonb-dependent receptor plug domain protein | CUU_1061 | Not Available | - | 2405845 - 2408922 | 113749.0 |
| rna polymerase sigma-70 factor | CUU_1062 | Not Available | - | 2409048 - 2409593 | 21359.8 |
| glycosyl hydrolase, family 88 | CUU_1063 | Not Available | - | 2409618 - 2410850 | 46782.0 |
| transcriptional regulator, arac family | CUU_1064 | Not Available | - | 2411080 - 2413884 | 106145.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
