Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein | CUU_1025 | Not Available | + | 2342153 - 2342716 | 21611.7 |
| trna isopentenyltransferase | CUU_1026 | Not Available | + | 2342768 - 2343670 | 35088.3 |
| alpha-l-fucosidase | CUU_1027 | Not Available | + | 2343679 - 2345718 | 76768.4 |
| conserved hypothetical protein | CUU_1028 | Not Available | - | 2345896 - 2346669 | 29871.5 |
| putative alpha-1,3-galactosidase b | CUU_1029 | Not Available | - | 2346925 - 2348703 | 66487.2 |
| oxidoreductase, nad-binding domain protein | CUU_1030 | Not Available | - | 2349064 - 2350614 | 57407.6 |
| putative lipoprotein | CUU_1031 | Not Available | - | 2350842 - 2352653 | 69404.4 |
| tonb-dependent receptor plug domain protein | CUU_1032 | Not Available | - | 2352671 - 2355931 | 120872.0 |
| sigma factor regulatory protein, fecr/pupr family | CUU_1033 | Not Available | - | 2356201 - 2357175 | 37407.0 |
| rna polymerase sigma-70 factor | CUU_1034 | Not Available | - | 2357304 - 2357849 | 21780.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
