Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulatory protein, c-terminal domain protein | CUU_0995 | Not Available | + | 2299986 - 2300984 | 38428.7 |
| putative lipoprotein | CUU_0996 | Not Available | - | 2301744 - 2302823 | 40319.9 |
| homoserine dehydrogenase, nad binding domain protein | CUU_0997 | Not Available | + | 2303120 - 2303806 | 24437.4 |
| 4-phosphoerythronate dehydrogenase | CUU_0998 | Not Available | - | 2303892 - 2304839 | 35027.1 |
| dnaj domain protein | CUU_0999 | Not Available | + | 2304883 - 2305665 | 29022.9 |
| peptide chain release factor 3 | CUU_1000 | Not Available | - | 2305740 - 2307308 | 59982.5 |
| dtdp-4-dehydrorhamnose reductase | CUU_1001 | Not Available | - | 2307315 - 2308172 | 32010.2 |
| conserved hypothetical protein | CUU_1002 | Not Available | - | 2308187 - 2308729 | 21340.1 |
| translocator protein, lyse family | CUU_1003 | Not Available | - | 2308801 - 2309460 | 24319.7 |
| putative phosphoribosylformylglycinamidine synthase | CUU_1004 | Not Available | + | 2309611 - 2313315 | 137107.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
