Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribulose-phosphate 3-epimerase | CUU_0975 | Not Available | - | 2274374 - 2275027 | 23913.3 |
| conserved hypothetical protein | CUU_0976 | Not Available | - | 2275103 - 2276398 | 48112.6 |
| sigma-70 region 2 | CUU_0977 | Not Available | - | 2276401 - 2276985 | 22518.9 |
| putative lipoprotein | CUU_0978 | Not Available | + | 2277101 - 2277883 | 28981.6 |
| methionyl-trna formyltransferase | CUU_0979 | Not Available | - | 2277956 - 2278930 | 36639.5 |
| chloride transporter, clc family | CUU_0980 | Not Available | - | 2278944 - 2280746 | 66950.9 |
| sua5/ycio/yrdc/ywlc family protein | CUU_0981 | Not Available | - | 2280755 - 2281330 | 21163.3 |
| n-acetylglucosamine-6-phosphate deacetylase | CUU_0982 | Not Available | - | 2281497 - 2282660 | 42262.9 |
| putative membrane protein | CUU_0983 | Not Available | - | 2282751 - 2285927 | 121041.0 |
| outer membrane efflux protein | CUU_0984 | Not Available | - | 2285924 - 2287390 | 56003.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
