Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor plug domain protein | CUU_0965 | Not Available | - | 2259168 - 2262239 | 113152.0 |
| glycosyl hydrolase, family 43 | CUU_0966 | Not Available | - | 2262281 - 2264017 | 64613.4 |
| glycosyl hydrolase, family 43 | CUU_0967 | Not Available | - | 2264367 - 2265338 | 36808.1 |
| glycosyl hydrolase family 10 | CUU_0968 | Not Available | - | 2265351 - 2266472 | 42053.5 |
| sugar (glycoside-pentoside-hexuronide) transporter | CUU_0969 | Not Available | - | 2266512 - 2268050 | 56265.9 |
| glycosyl hydrolase family 16 | CUU_0970 | Not Available | - | 2268333 - 2269124 | 30525.3 |
| phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain ii | CUU_0971 | Not Available | - | 2269215 - 2270603 | 50475.7 |
| putative lipoprotein | CUU_0972 | Not Available | - | 2270600 - 2271235 | 24137.5 |
| dhha1 domain protein | CUU_0973 | Not Available | - | 2271318 - 2272358 | 39348.3 |
| comec/rec2-like protein | CUU_0974 | Not Available | - | 2272408 - 2274360 | 73722.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
