Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Tmrna,resume consensus sequence (at 89): tttatctggcaacgaaaa | Not Available | Not Available | + | 2241370 - 2241764 | Not Available |
| putative lipoprotein | CUU_0680 | Not Available | + | 2241905 - 2243071 | 42688.8 |
| phosphomannose isomerase type i | CUU_0681 | Not Available | - | 2243163 - 2244134 | 36199.5 |
| conserved hypothetical protein | CUU_0682 | Not Available | - | 2244248 - 2245855 | 57856.1 |
| tonb-dependent receptor | CUU_0683 | Not Available | - | 2245862 - 2248624 | 104335.0 |
| beta-eliminating lyase | CUU_0684 | Not Available | + | 2248793 - 2249809 | 37852.4 |
| tonb-dependent receptor plug domain protein | CUU_3956 | Not Available | + | 2249941 - 2253278 | 122229.0 |
| putative lipoprotein | CUU_3957 | Not Available | + | 2253314 - 2255173 | 70276.5 |
| conserved hypothetical protein | CUU_3958 | Not Available | + | 2255500 - 2256693 | 45839.4 |
| putative lipoprotein | CUU_0964 | Not Available | - | 2257219 - 2259153 | 71558.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
