Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nadh-ubiquinone/plastoquinone oxidoreductase chain 6 | CUU_0669 | Not Available | + | 2229206 - 2229709 | 18224.2 |
| nadh-ubiquinone/plastoquinone oxidoreductase chain 4l | CUU_0670 | Not Available | + | 2229715 - 2230023 | 11758.6 |
| putative nad(p)h-quinone oxidoreductase subunit f | CUU_0671 | Not Available | + | 2230026 - 2231927 | 70331.2 |
| proton-translocating nadh-quinone oxidoreductase, chain m | CUU_0672 | Not Available | + | 2231981 - 2233462 | 53794.6 |
| proton-translocating nadh-quinone oxidoreductase, chain n | CUU_0673 | Not Available | + | 2233520 - 2234914 | 51219.1 |
| glycosyl hydrolase, family 88 | CUU_0674 | Not Available | + | 2235090 - 2236316 | 46630.1 |
| conserved domain protein | CUU_0675 | Not Available | - | 2236318 - 2236524 | 7616.17 |
| polygalacturonase (pectinase) | CUU_0676 | Not Available | + | 2236995 - 2238401 | 52445.8 |
| cobw/p47k family protein | CUU_0677 | Not Available | - | 2238465 - 2239715 | 47736.0 |
| alpha-l-fucosidase | CUU_0678 | Not Available | + | 2239864 - 2241189 | 50388.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
