Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gscfa family protein | CUU_0659 | Not Available | - | 2218677 - 2219663 | 38641.5 |
| 1-deoxy-d-xylulose-5-phosphate synthase | CUU_0660 | Not Available | + | 2219720 - 2221654 | 71724.9 |
| trka-c domain protein | CUU_0661 | Not Available | + | 2221667 - 2223007 | 49307.5 |
| putative trk system potassium uptake protein trkh | CUU_0662 | Not Available | + | 2223007 - 2224461 | 53478.3 |
| conserved hypothetical protein | CUU_0663 | Not Available | + | 2224564 - 2224941 | 14702.8 |
| nadh-ubiquinone/plastoquinone oxidoreductase, chain 3 | CUU_0664 | Not Available | + | 2225045 - 2225395 | 13099.5 |
| nadh-quinone oxidoreductase, b subunit | CUU_0665 | Not Available | + | 2225386 - 2225982 | 22081.9 |
| respiratory-chain nadh dehydrogenase, 49 kd subunit | CUU_0666 | Not Available | + | 2225979 - 2227538 | 59743.6 |
| nadh dehydrogenase | CUU_0667 | Not Available | + | 2227716 - 2228738 | 38125.1 |
| 4fe-4s binding domain protein | CUU_0668 | Not Available | + | 2228738 - 2229190 | 16944.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
