Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative succinate-semialdehyde dehydrogenase | CUU_0639 | Not Available | - | 2187425 - 2188861 | 52508.2 |
| transcriptional regulator, arac family | CUU_0640 | Not Available | - | 2189073 - 2191871 | 106430.0 |
| conserved hypothetical protein | CUU_0641 | Not Available | - | 2192542 - 2193939 | 53086.0 |
| putative dna-binding protein | CUU_0642 | Not Available | + | 2194268 - 2194948 | 25970.1 |
| rna polymerase sigma-70 factor | CUU_0643 | Not Available | - | 2195141 - 2195707 | 22233.8 |
| sigma factor regulatory protein, fecr/pupr family | CUU_0644 | Not Available | + | 2195850 - 2196863 | 38548.0 |
| tonb-dependent receptor | CUU_0645 | Not Available | + | 2197117 - 2200482 | 124292.0 |
| conserved hypothetical protein | CUU_0646 | Not Available | + | 2200495 - 2202120 | 61301.7 |
| arylsulfatase | CUU_0647 | Not Available | + | 2202138 - 2203553 | 53041.0 |
| conserved hypothetical protein | CUU_0648 | Not Available | + | 2203953 - 2205275 | 49712.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
