Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | CUU_0609 | Not Available | - | 2127080 - 2128603 | 56236.2 |
| putative membrane protein | CUU_0610 | Not Available | + | 2128884 - 2131136 | 83841.5 |
| mucin-desulfating sulfatase | CUU_0611 | Not Available | + | 2131244 - 2132326 | 41565.0 |
| peptidase, s9a/b/c familie, catalytic domain protein | CUU_0612 | Not Available | - | 2132412 - 2134853 | 94234.0 |
| conserved hypothetical protein | CUU_0613 | Not Available | - | 2134963 - 2135676 | 26165.1 |
| sensor histidine kinase/response regulator | CUU_0614 | Not Available | - | 2135893 - 2140308 | 169817.0 |
| gdsl-like protein | CUU_0615 | Not Available | - | 2140488 - 2142197 | 63441.6 |
| conserved hypothetical protein | CUU_0616 | Not Available | - | 2142222 - 2143382 | 43407.2 |
| putative pectate lyase | CUU_0617 | Not Available | - | 2143403 - 2145016 | 61374.3 |
| cupin domain protein | CUU_0618 | Not Available | + | 2145205 - 2145696 | 18194.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
