Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| homoserine o-succinyltransferase | CUU_2015 | Not Available | - | 2029882 - 2030799 | 35760.9 |
| alpha-l-fucosidase | CUU_2016 | Not Available | - | 2030896 - 2032347 | 56240.5 |
| glycosyl hydrolase family 2, sugar binding domain protein | CUU_2017 | Not Available | - | 2032393 - 2034522 | 81123.0 |
| glycosyl hydrolase, family 88 | CUU_2018 | Not Available | - | 2034542 - 2035675 | 43260.8 |
| sensor histidine kinase/response regulator | CUU_2019 | Not Available | - | 2035765 - 2039715 | 151763.0 |
| f5/8 type c domain protein | CUU_2020 | Not Available | - | 2039929 - 2041095 | 42505.0 |
| ragb, susd and hypothetical protein | CUU_2021 | Not Available | - | 2041118 - 2043031 | 73474.8 |
| tonb-dependent receptor plug domain protein | CUU_2022 | Not Available | - | 2043125 - 2046388 | 121889.0 |
| oxidoreductase, nad-binding domain protein | CUU_2023 | Not Available | + | 2047093 - 2048601 | 56066.1 |
| nitroreductase family protein | CUU_2024 | Not Available | - | 2048968 - 2049696 | 27860.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
