Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| threonine synthase | CUU_2005 | Not Available | - | 2014249 - 2015550 | 47801.0 |
| proposed homoserine kinase | CUU_2006 | Not Available | - | 2015641 - 2016852 | 44539.4 |
| homoserine dehydrogenase | CUU_2007 | Not Available | - | 2016857 - 2019325 | 89900.2 |
| dna repair protein rada | CUU_2008 | Not Available | + | 2019817 - 2021184 | 49904.5 |
| conserved hypothetical protein | CUU_2009 | Not Available | + | 2021224 - 2021874 | 24388.4 |
| flavoprotein family protein | CUU_2010 | Not Available | + | 2021880 - 2023523 | 60702.7 |
| transcriptional regulator, luxr family | CUU_2011 | Not Available | + | 2023627 - 2024271 | 24366.8 |
| tonb-dependent receptor | CUU_2012 | Not Available | + | 2024441 - 2026867 | 92190.1 |
| putative lipoprotein | CUU_2013 | Not Available | - | 2027107 - 2028069 | 36776.0 |
| peptidase, u32 family | CUU_2014 | Not Available | - | 2028056 - 2029885 | 69841.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
