Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| prephenate dehydratase | CUU_1994 | Not Available | + | 2001607 - 2002449 | 31728.1 |
| aminotransferase, class i/ii | CUU_1995 | Not Available | + | 2002424 - 2003608 | 45068.2 |
| putative phospho-2-dehydro-3-deoxyheptonate aldolase | CUU_1996 | Not Available | + | 2003628 - 2004695 | 39929.6 |
| prephenate dehydrogenase | CUU_1997 | Not Available | + | 2004700 - 2005473 | 29390.4 |
| hydrolase, alpha/beta domain protein | CUU_1998 | Not Available | - | 2005709 - 2006680 | 34854.5 |
| tonb-dependent receptor | CUU_2000 | Not Available | + | 2007236 - 2009257 | 76073.0 |
| conserved hypothetical protein | CUU_2001 | Not Available | + | 2009327 - 2010379 | 39982.3 |
| periplasmic binding protein | CUU_2002 | Not Available | + | 2010383 - 2011519 | 42104.2 |
| iron chelate uptake abc transporter, fect family, permease protein | CUU_2003 | Not Available | + | 2011635 - 2012666 | 36121.7 |
| abc transporter, atp-binding protein | CUU_2004 | Not Available | + | 2012666 - 2013673 | 37144.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
