Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidase c1-like protein | CUU_1984 | Not Available | + | 1989595 - 1990842 | 47302.1 |
| single-stranded-dna-specific exonuclease recj | CUU_1985 | Not Available | + | 1990957 - 1992729 | 66543.5 |
| atp-dependent dna helicase, recq family | CUU_1986 | Not Available | + | 1992847 - 1994742 | 72880.8 |
| o-glcnacase nagj family protein | CUU_1987 | Not Available | + | 1994789 - 1997002 | 85039.3 |
| tetratricopeptide repeat protein | CUU_1988 | Not Available | + | 1997017 - 1997967 | 35751.7 |
| putative membrane protein | CUU_1989 | Not Available | + | 1998027 - 1999028 | 36967.9 |
| aminotransferase, class i/ii | CUU_1990 | Not Available | - | 1999029 - 2000204 | 44770.1 |
| dj-1/pfpi family protein | CUU_1991 | Not Available | - | 2000273 - 2000803 | 18966.9 |
| hypothetical protein | CUU_1992 | Not Available | - | 2000873 - 2001007 | 5035.32 |
| transcriptional regulator, hxlr family | CUU_1993 | Not Available | + | 2000993 - 2001349 | 13384.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
