Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| outer membrane efflux protein | CUU_3102 | Not Available | + | 1928997 - 1930304 | 50704.1 |
| efflux transporter, rnd family, mfp subunit | CUU_3103 | Not Available | + | 1930310 - 1931560 | 47799.6 |
| putative bacteriocin abc transporter | CUU_3104 | Not Available | + | 1931574 - 1932284 | 26421.1 |
| efflux abc transporter, permease protein | CUU_3105 | Not Available | + | 1932281 - 1934704 | 91918.5 |
| integrase core domain protein | CUU_3106 | Not Available | + | 1935998 - 1937395 | 54147.8 |
| conserved domain protein | CUU_3107 | Not Available | + | 1937407 - 1937592 | 6744.12 |
| istb-like atp-binding protein | CUU_3108 | Not Available | + | 1937707 - 1938195 | 18291.3 |
| conserved hypothetical protein | CUU_3109 | Not Available | + | 1938867 - 1939076 | 8005.49 |
| conserved hypothetical protein | CUU_3110 | Not Available | + | 1939232 - 1939471 | 9341.28 |
| conserved hypothetical protein | CUU_3111 | Not Available | + | 1939571 - 1939690 | 4688.81 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
