Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| small gtp-binding protein domain protein | CUU_2466 | Not Available | + | 1859482 - 1860672 | 43847.5 |
| histidine--trna ligase | CUU_2467 | Not Available | - | 1861252 - 1862616 | 50329.7 |
| periplasmic binding protein and sugar binding domain of the laci family protein | CUU_2468 | Not Available | - | 1862775 - 1863623 | 31247.0 |
| putative membrane protein | CUU_2469 | Not Available | - | 1863631 - 1864647 | 35979.8 |
| l-fucose isomerase, c-terminal domain protein | CUU_2470 | Not Available | - | 1864660 - 1866084 | 52346.9 |
| putative glycerol kinase | CUU_2471 | Not Available | - | 1866118 - 1867614 | 55248.4 |
| transketolase, c-terminal domain protein | CUU_2472 | Not Available | - | 1867640 - 1868578 | 33694.6 |
| transketolase, thiamine diphosphate binding domain protein | CUU_2473 | Not Available | - | 1868568 - 1869446 | 32799.2 |
| transcriptional regulator, deor family | CUU_2474 | Not Available | - | 1869757 - 1870512 | 27350.1 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | CUU_2475 | Not Available | - | 1870524 - 1871138 | 22216.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
