Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| efflux abc transporter, permease protein | CUU_3452 | Not Available | + | 1823821 - 1826190 | 90175.0 |
| efflux abc transporter, permease protein | CUU_3453 | Not Available | + | 1826211 - 1828610 | 91431.7 |
| putative bacteriocin abc transporter | CUU_3454 | Not Available | + | 1828630 - 1829304 | 24767.0 |
| efflux abc transporter, permease protein | CUU_3455 | Not Available | + | 1829364 - 1831715 | 89889.0 |
| putative membrane protein | CUU_3456 | Not Available | - | 1831723 - 1832610 | 31847.8 |
| putative 8-amino-7-oxononanoate synthase | CUU_3457 | Not Available | - | 1832698 - 1833885 | 44190.9 |
| lipid kinase, yegs/bmru family | CUU_3458 | Not Available | + | 1834130 - 1835164 | 38175.2 |
| methyltransferase small domain protein | CUU_3459 | Not Available | - | 1835245 - 1835949 | 26207.4 |
| endopeptidase la | CUU_3460 | Not Available | + | 1836131 - 1838608 | 92665.5 |
| pp_01570 | CUU_3461 | Not Available | + | 1838611 - 1839741 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
