Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | CUU_4028 | Not Available | - | 1811427 - 1812281 | 32554.4 |
| peptide-methionine (s)-s-oxide reductase | CUU_4030 | Not Available | + | 1812399 - 1812578 | 6631.93 |
| transposase, is4 family | CUU_4021 | Not Available | + | 1812931 - 1814001 | 41215.4 |
| Trna-pro | Not Available | Not Available | + | 1814472 - 1814546 | Not Available |
| sensor histidine kinase/response regulator | CUU_3446 | Not Available | - | 1814706 - 1816037 | 50551.9 |
| response regulator receiver domain protein | CUU_3447 | Not Available | - | 1816034 - 1817401 | 51877.1 |
| sel1 repeat protein | CUU_3448 | Not Available | + | 1817703 - 1818548 | 32040.8 |
| outer membrane efflux protein | CUU_3449 | Not Available | + | 1818598 - 1820067 | 55871.3 |
| efflux transporter, rnd family, mfp subunit | CUU_3450 | Not Available | + | 1820150 - 1821400 | 48108.4 |
| efflux abc transporter, permease protein | CUU_3451 | Not Available | + | 1821411 - 1823807 | 92761.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
