Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rnd transporter, hydrophobe/amphiphile efflux-1 (hae1) family protein | CUU_3215 | Not Available | + | 1770551 - 1773652 | 113097.0 |
| efflux transporter, outer membrane factor lipoprotein, nodt family | CUU_3216 | Not Available | + | 1773674 - 1775047 | 51778.1 |
| conserved hypothetical protein | CUU_3217 | Not Available | - | 1775086 - 1776270 | 44791.0 |
| conserved hypothetical protein | CUU_3218 | Not Available | + | 1776400 - 1777578 | 46118.2 |
| pyruvate:ferredoxin (flavodoxin) oxidoreductase | CUU_3219 | Not Available | + | 1777621 - 1781166 | 129303.0 |
| transposase, is4 family | CUU_3467 | Not Available | + | 1781268 - 1782179 | 35295.1 |
| transcriptional regulator, luxr family | CUU_3468 | Not Available | + | 1782254 - 1782709 | 17709.4 |
| conserved hypothetical protein | CUU_3469 | Not Available | - | 1782838 - 1783293 | 16338.5 |
| conserved hypothetical protein | CUU_3470 | Not Available | - | 1783312 - 1783818 | 18792.3 |
| putative lipoprotein | CUU_3471 | Not Available | - | 1783823 - 1784530 | 25920.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
