Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna ligase (nad(+)) | CUU_3503 | Not Available | - | 1716079 - 1718076 | 75145.7 |
| trna (guanine-n(1)-)-methyltransferase | CUU_3504 | Not Available | + | 1718175 - 1718849 | 25441.7 |
| dihydroorotate dehydrogenase 1b | CUU_3505 | Not Available | - | 1719216 - 1720127 | 32363.4 |
| oxidoreductase nad-binding domain protein | CUU_3506 | Not Available | - | 1720115 - 1720948 | 30744.9 |
| conserved hypothetical protein | CUU_3507 | Not Available | - | 1720988 - 1721305 | 12398.5 |
| dna polymerase iii, delta subunit | CUU_3508 | Not Available | - | 1722563 - 1723579 | 38804.2 |
| putative amp nucleosidase | CUU_3509 | Not Available | - | 1723591 - 1724367 | 29142.2 |
| conserved hypothetical protein | CUU_3510 | Not Available | + | 1724425 - 1724874 | 17607.4 |
| conserved hypothetical protein | CUU_3511 | Not Available | - | 1724975 - 1725766 | 30517.8 |
| dinuclear metal center protein, ybgi family | CUU_3512 | Not Available | - | 1725775 - 1726869 | 40621.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
